[![Build Status](https://travis-ci.org/wang-q/App-RL.svg?branch=master)](https://travis-ci.org/wang-q/App-RL) [![Coverage Status](http://codecov.io/github/wang-q/App-RL/coverage.svg?branch=master)](https://codecov.io/github/wang-q/App-RL?branch=master) [![MetaCPAN Release](https://badge.fury.io/pl/App-RL.svg)](https://metacpan.org/release/App-RL) # NAME App::RL - operating chromosome runlist files # SYNOPSIS runlist [-?h] [long options...] -? -h --help show help Available commands: commands: list the application's commands help: display a command's help screen combine: combine multiple sets of runlists compare: compare 2 chromosome runlists cover: output covers of positions on chromosomes genome: convert chr.size to runlists merge: merge runlist yaml files position: compare runlists against positions some: extract some records span: operate spans in a YAML file split: split runlist yaml files stat: coverage on chromosomes for runlists stat2: coverage on another runlist for runlists See `runlist commands` for usage information. # AUTHOR Qiang Wang # COPYRIGHT AND LICENSE This software is copyright (c) 2015 by Qiang Wang. This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.