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ParserSupport.AbstractParser --+
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MEMEParser
A parser for the text output of the MEME program.
Parses the output into an object of the MEMERecord class.
Methods:
parse (handle): parses the contents of the file handle passed to it.
Example:
f = open("meme.output.txt")
parser = MEMEParser()
meme_record = parser.parse(f)
for motif in meme_record.motifs:
for instance in motif.instances:
print instance.motif_name, instance.sequence_name, instance.strand, instance.pvalue
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Inherited from |
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parse (self, handle)
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