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available_matrices = ['benner6', 'benner22', 'benner74', 'blos...
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benner6 = {('A', 'A'): 2.5, ('A', 'C'): -1.7, ('A', 'P'): 1.1,...
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benner22 = {('A', 'A'): 2.5, ('A', 'C'): -1.2, ('A', 'P'): 0.8...
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benner74 = {('A', 'A'): 2.4, ('A', 'C'): 0.3, ('A', 'P'): 0.4,...
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blosum100 = {('A', 'A'): 5, ('B', 'A'): -3, ('B', 'B'): 4, ('B...
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blosum30 = {('A', 'A'): 4, ('B', 'A'): 0, ('B', 'B'): 5, ('B',...
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blosum35 = {('A', 'A'): 5, ('B', 'A'): -1, ('B', 'B'): 5, ('B'...
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blosum40 = {('A', 'A'): 5, ('B', 'A'): -1, ('B', 'B'): 5, ('B'...
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blosum45 = {('A', 'A'): 5, ('B', 'A'): -1, ('B', 'B'): 4, ('B'...
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blosum50 = {('A', 'A'): 5, ('B', 'A'): -2, ('B', 'B'): 5, ('B'...
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blosum55 = {('A', 'A'): 5, ('B', 'A'): -2, ('B', 'B'): 5, ('B'...
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blosum60 = {('A', 'A'): 4, ('B', 'A'): -2, ('B', 'B'): 4, ('B'...
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blosum62 = {('A', 'A'): 4, ('B', 'A'): -2, ('B', 'B'): 4, ('B'...
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blosum65 = {('A', 'A'): 4, ('B', 'A'): -2, ('B', 'B'): 4, ('B'...
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blosum70 = {('A', 'A'): 4, ('B', 'A'): -2, ('B', 'B'): 4, ('B'...
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blosum75 = {('A', 'A'): 4, ('B', 'A'): -2, ('B', 'B'): 4, ('B'...
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blosum80 = {('A', 'A'): 5, ('B', 'A'): -2, ('B', 'B'): 4, ('B'...
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blosum85 = {('A', 'A'): 5, ('B', 'A'): -2, ('B', 'B'): 4, ('B'...
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blosum90 = {('A', 'A'): 5, ('B', 'A'): -2, ('B', 'B'): 4, ('B'...
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blosum95 = {('A', 'A'): 5, ('B', 'A'): -3, ('B', 'B'): 4, ('B'...
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feng = {('A', 'A'): 6, ('A', 'C'): 2, ('A', 'P'): 5, ('A', 'S'...
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fitch = {('A', 'A'): 3, ('C', 'A'): 1, ('C', 'C'): 3, ('E', 'A...
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genetic = {('A', 'A'): 4.0, ('A', 'C'): -1.9, ('A', 'P'): 0.8,...
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gonnet = {('A', 'A'): 2.4, ('A', 'C'): 0.5, ('A', 'P'): 0.3, (...
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grant = {('A', 'A'): 215, ('A', 'C'): 61, ('A', 'E'): 130, ('A...
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ident = {('A', 'A'): 6, ('A', 'C'): -1, ('A', 'P'): -1, ('A', ...
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johnson = {('A', 'A'): 6.0, ('C', 'A'): -3.4, ('C', 'C'): 16.1...
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levin = {('A', 'A'): 2, ('A', 'D'): 0, ('A', 'E'): 1, ('A', 'G...
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mclach = {('A', 'A'): 8, ('A', 'F'): 1, ('A', 'G'): 3, ('A', '...
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miyata = {('A', 'A'): 1.25, ('A', 'C'): -0.14, ('A', 'P'): 1.1...
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nwsgappep = {('A', 'A'): 1.5, ('B', 'A'): 0.2, ('B', 'B'): 1.1...
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pam120 = {('A', 'A'): 3, ('B', 'A'): 0, ('B', 'B'): 4, ('B', '...
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pam180 = {('A', 'A'): 3, ('B', 'A'): 0, ('B', 'B'): 4, ('B', '...
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pam250 = {('A', 'A'): 2, ('B', 'A'): 0, ('B', 'B'): 3, ('B', '...
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pam30 = {('A', 'A'): 6, ('B', 'A'): -3, ('B', 'B'): 6, ('B', '...
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pam300 = {('A', 'A'): 2, ('B', 'A'): 0, ('B', 'B'): 3, ('B', '...
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pam60 = {('A', 'A'): 5, ('B', 'A'): -2, ('B', 'B'): 5, ('B', '...
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pam90 = {('A', 'A'): 4, ('B', 'A'): -1, ('B', 'B'): 4, ('B', '...
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rao = {('A', 'A'): 16, ('C', 'A'): 11, ('C', 'C'): 16, ('D', '...
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risler = {('A', 'A'): 2.2, ('C', 'A'): -1.5, ('C', 'C'): 2.2, ...
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structure = {('A', 'A'): 4, ('A', 'C'): -2, ('A', 'P'): -1, ('...
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