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object --+
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dict --+
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SeqMat
A Generic sequence matrix class The key is a 2-tuple containing the letter indices of the matrix. Those should be sorted in the tuple (low, high). Because each matrix is dealt with as a half-matrix.
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new empty dictionary |
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Inherited from Inherited from |
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Inherited from |
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x.__init__(...) initializes x; see x.__class__.__doc__ for signature
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Print a nice half-matrix. f=sys.stdout to see on the screen User may pass own alphabet, which should contain all letters in the alphabet of the matrix, but may be in a different order. This order will be the order of the letters on the axes |
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| Generated by Epydoc 3.0.1 on Sun May 3 17:14:24 2009 | http://epydoc.sourceforge.net |