| Trees | Indices | Help |
|---|
|
|
Bio.SeqIO support for the "swiss" (aka SwissProt/UniProt) file format.
You are expected to use this module via the Bio.SeqIO functions. See also the Bio.SwissProt module which offers more than just accessing the sequences as SeqRecord objects.
|
|||
|
|||
|
|||
Breaks up a Swiss-Prot/UniProt file into SeqRecord objects. Every section from the ID line to the terminating // becomes a single SeqRecord with associated annotation and features. This parser is for the flat file "swiss" format as used by: * Swiss-Prot aka SwissProt * TrEMBL * UniProtKB aka UniProt Knowledgebase It does NOT read their new XML file format. http://www.expasy.org/sprot/ For consistency with BioPerl and EMBOSS we call this the "swiss" format. |
| Trees | Indices | Help |
|---|
| Generated by Epydoc 3.0.1 on Sun May 3 17:14:12 2009 | http://epydoc.sourceforge.net |