Package Bio :: Package PDB :: Module Superimposer' :: Class Superimposer
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Class Superimposer

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Rotate/translate one set of atoms on top of another, thereby minimizing the RMSD.

Instance Methods [hide private]
 
__init__(self) source code
 
apply(self, atom_list)
Rotate/translate a list of atoms.
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set_atoms(self, fixed, moving)
Put (translate/rotate) the atoms in fixed on the atoms in moving, in such a way that the RMSD is minimized.
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Method Details [hide private]

set_atoms(self, fixed, moving)

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Put (translate/rotate) the atoms in fixed on the atoms in moving, in such a way that the RMSD is minimized.

Parameters:
  • fixed - list of (fixed) atoms
  • moving - list of (moving) atoms
  • fixed,moving ([Atom, Atom,...])