Package Bio :: Package MEME :: Module Parser :: Class _MEMEScanner
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Class _MEMEScanner

source code

Scanner for MEME output (OBSOLETE).

Methods: feed

This class is OBSOLETE; its functionality is now available through Bio.Motif.Parsers.MEME.

Instance Methods [hide private]
 
feed(self, handle, consumer)
Feeds in MEME output for scanning.
source code
 
_scan_header(self, uhandle, consumer) source code
 
_scan_motifs(self, uhandle, consumer) source code
Method Details [hide private]

feed(self, handle, consumer)

source code 

Feeds in MEME output for scanning. handle should implement the readline method. consumer is a Consumer object that can receive the salient events.